MPGR BLAST Databases
Databases that are available when using BLASTN, TBLASTN or TBLASTX:
- Gene models from fully sequenced plant genomes
- Transcripts assemblies (PUTs from PlantGDB) from Medicinal Plant species
- Cannabis sativa - version 179a
- Catharanthus roseus - version 179a
- Ginkgo biloba - version 179a
- Panax quinquefolius - version 179a
- Transcripts assemblies (from MPGR) from Medicinal plants species
- The versions of the transcripts assemblies are labeled by date release.
- Atropa belladonna - MSU v20111007
- Camptotheca acuminata - MSU v20111007
- Cannabis sativa - MSU v20111007
- Catharanthus roseus - MSU v20111007
- Digitalis purpurea - MSU v20111007
- Dioscorea villosa - MSU v20111007
- Echinacea purpurea - MSU v20111007
- Ginkgo biloba - MSU v20111007
- Hoodia gordonii - MSU v20111007
- Hypericum perforatum - MSU v20111007
- Panax quinquefolius - MSU v20111007
- Rauvolfia serpentina - MSU v20111007
- Rosmarinus officinalis - MSU v20111007
- Valeriana officinalis - MSU v20111007
Databases that are available when using BLASTP or BLASTX:
- Predicted protein sequences from fully sequenced plant genomes
- ESTScan translations of sequence assemblies (MPGR) from Medicinal Plant species
- Atropa belladonna - MSU v20111007
- Camptotheca acuminata - MSU v20111007
- Cannabis sativa - MSU v20111007
- Catharanthus roseus - MSU v20111007
- Digitalis purpurea - MSU v20111007
- Dioscorea villosa - MSU v20111007
- Echinacea purpurea - MSU v20111007
- Ginkgo biloba - MSU v20111007
- Hoodia gordonii - MSU v20111007
- Hypericum perforatum - MSU v20111007
- Panax quinquefolius - MSU v20111007
- Rauvolfia serpentina - MSU v20111007
- Rosmarinus officinalis - MSU v20111007
- Valeriana officinalis - MSU v20111007
- Genbank peptides (NCBI)
from Medicinal Plant species
- Medicinal plants Genbank Peptides