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Atropa belladonna
Camptotheca acuminata
Cannabis sativa
Catharanthus roseus
Digitalis purpurea
Dioscorea villosa
Echinacea purpurea
Ginkgo biloba
Hoodia gordonii
Hypericum perforatum
Panax quinquefolius
Rauvolfia serpentina
Rosmarinus officinalis
Valeriana officinalis
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BLAST Search
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Processing Your BLAST Request...
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Select type of BLAST Search
blastn
blastx
tblastx
tblastn
blastp
Search a nucleotide database using a nucleotide query sequence.
Select database
Atropa belladonna sequence assembly (MSU v1)
Atropa belladonna sequence assembly (MSU v2)
Atropa belladonna sequence assembly (MSU vf)
Calotropis gigantea - Scaffold Sequences
Calotropis gigantea - High Conf Gene Model Set CDS
Calotropis gigantea - High Conf Gene Model Set cDNA
Calotropis gigantea - Working Gene Model Set CDS
Calotropis gigantea - Working Gene Model Set cDNA
Camptotheca acuminata sequence assembly (MSU v3)
Camptotheca acuminata sequence assembly (MSU vf)
Camptotheca acuminata - Scaffold Sequences
Camptotheca acuminata - High Conf Gene Model Set CDS
Camptotheca acuminata - High Conf Gene Model Set cDNA
Camptotheca acuminata - Working Gene Model Set CDS
Camptotheca acuminata - Working Gene Model Set cDNA
Cannabis sativa sequence assembly (MSU v1)
Cannabis sativa sequence assembly (MSU vf)
Cannabis sativa mRNA (PlantGDB)
Catharanthus roseus mRNA (PlantGDB)
Catharanthus roseus Sunstorm Apricot v1.0 - Scaffold Sequences
Catharanthus roseus Sunstorm Apricot v1.0 - CDS Sequences
Catharanthus roseus Sunstorm Apricot v1.0 - Transcripts Sequences
Catharanthus roseus sequence assembly (MSU v1)
Catharanthus roseus sequence assembly (MSU vf)
Digitalis purpurea sequence assembly (MSU v1)
Digitalis purpurea sequence assembly (MSU vf)
Dioscorea villosa sequence assembly (MSU v1)
Dioscorea villosa sequence assembly (MSU vf)
Echinacea purpurea sequence assembly (MSU v1)
Echinacea purpurea sequence assembly (MSU vf)
Ginkgo biloba sequence assembly (MSU v1)
Ginkgo biloba sequence assembly (MSU vf)
Ginkgo biloba mRNA (PlantGDB)
Hoodia gordonii sequence assembly (MSU v1)
Hoodia gordonii sequence assembly (MSU vf)
Hypericum perforatum sequence assembly (MSU v1)
Hypericum perforatum sequence assembly (MSU vf)
Medicinal plants GenBank ESTs
Mitragyna speciosa - Scaffold Sequences
Mitragyna speciosa - High Conf Gene Model Set CDS
Mitragyna speciosa - High Conf Gene Model Set cDNA
Mitragyna speciosa - Working Gene Model Set CDS
Mitragyna speciosa - Working Gene Model Set cDNA
Panax quinquefolius mRNA (PlantGDB)
Panax quinquefolius sequence assembly (MSU v1)
Panax quinquefolius sequence assembly (MSU vf)
Rauvolfia serpentina sequence assembly (MSU v1)
Rauvolfia serpentina sequence assembly (MSU vf)
Rosmarinus officinalis sequence assembly (MSU v1)
Rosmarinus officinalis sequence assembly (MSU vf)
Valeriana officinalis sequence assembly (MSU v1)
Valeriana officinalis sequence assembly (MSU vf)
Select the database to search using blastn.
Medicinal plants GenBank peptides
Arabidopsis thaliana peptides (TAIR10)
Atropa belladonna predicted peptides (MSU vf)
Camptotheca acuminata predicted peptides (MSU vf)
Camptotheca acuminata - High Conf Gene Model Set Proteins
Camptotheca acuminata - Working Gene Model Set Proteins
Cannabis sativa predicted peptides (MSU vf)
Catharanthus roseus predicted peptides (MSU vf)
Catharanthus roseus Sunstorm Apricot v1.0 - Proteins Sequences
Calotropis gigantea - High Conf Gene Model Set Proteins
Calotropis gigantea - Working Gene Model Set Proteins
Ginkgo biloba predicted peptides (MSU vf)
Digitalis purpurea predicted peptides (MSU vf)
Dioscorea villosa predicted peptides (MSU vf)
Echinacea purpurea predicted peptides (MSU vf)
Hoodia gordonii predicted peptides (MSU vf)
Hypericum perforatum predicted peptides (MSU vf)
Panax quinquefolius predicted peptides (MSU vf)
Mitragyna speciosa - High Conf Gene Model Set Proteins
Mitragyna speciosa - Working Gene Model Set Proteins
Rauvolfia serpentina predicted peptides (MSU vf)
Rosmarinus officinalis predicted peptides (MSU vf)
Valeriana officinalis predicted peptides (MSU vf)
Select the database to search using blastx.
Enter Query Sequence
Enter FASTA sequence:
Optional BLAST Parameters
Expect Threshold:
1e-200
1e-100
1e-50
1e-20
1e-10
1e-5
1e-4
1e-3
1e-2
1e-1
1
10
100
1000
Max Number of Alignments Reported:
1
5
10
20
50
Word Length:
7
11
15
Word Length:
2
3
Filter:
none
DUST
Filter:
none
SEG
Matrix:
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Submit BLAST Search
Search using blastn
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